Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 AC129336.2-201ENSMUST00000218053 3086 ntBASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm44207-201ENSMUST00000204568 1424 ntBASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav6n-6A0A075B6B2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm9200-201ENSMUST00000118513 1354 ntBASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms