Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PdfS4R2K0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
PdfS4R2K0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PdfS4R2K0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PdfS4R2K0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
PdfS4R2K0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
PdfS4R2K0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PdfS4R2K0 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm11425-201ENSMUST00000119608 498 ntBASIC9.18□□□□□ -0.94
PdfS4R2K0 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm22331-201ENSMUST00000158066 136 ntBASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.18□□□□□ -0.94
PdfS4R2K0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.18□□□□□ -0.94
PdfS4R2K0 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC9.18□□□□□ -0.94
PdfS4R2K0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.18□□□□□ -0.94
PdfS4R2K0 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
PdfS4R2K0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm9396-201ENSMUST00000076703 567 ntBASIC9.18□□□□□ -0.94
PdfS4R2K0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.18□□□□□ -0.94
PdfS4R2K0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
PdfS4R2K0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
PdfS4R2K0 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PdfS4R2K0 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.17□□□□□ -0.94
PdfS4R2K0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.17□□□□□ -0.94
PdfS4R2K0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.17□□□□□ -0.94
PdfS4R2K0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.17□□□□□ -0.94
PdfS4R2K0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Gm27731-201ENSMUST00000185192 107 ntBASIC9.17□□□□□ -0.94
PdfS4R2K0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PdfS4R2K0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.17□□□□□ -0.94
PdfS4R2K0 Gm37922-201ENSMUST00000195596 455 ntBASIC9.17□□□□□ -0.94
PdfS4R2K0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.17□□□□□ -0.94
PdfS4R2K0 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.17□□□□□ -0.94
PdfS4R2K0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms