Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Gm44364-201ENSMUST00000198368 141 ntBASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Rprl1-202ENSMUST00000198476 238 ntBASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn9Q9Z0S7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gm11511-201ENSMUST00000118146 540 ntBASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gm32999-201ENSMUST00000192693 562 ntBASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gm38341-201ENSMUST00000195357 515 ntBASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gm3961-201ENSMUST00000204425 994 ntBASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms