Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clcn2Q9R0A1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clcn2Q9R0A1 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clcn2Q9R0A1 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clcn2Q9R0A1 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Gm23270-201ENSMUST00000104055 131 ntBASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Gm24845-201ENSMUST00000158034 109 ntBASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Gm8885-201ENSMUST00000189382 598 ntBASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Gm37201-201ENSMUST00000191845 523 ntBASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clcn2Q9R0A1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clcn2Q9R0A1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms