Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Gm5705-201ENSMUST00000066241 711 ntBASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lonrf3Q9D4H7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Lonrf3Q9D4H7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lonrf3Q9D4H7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
Lonrf3Q9D4H7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Gm23251-201ENSMUST00000103773 110 ntBASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Gm13611-201ENSMUST00000118269 318 ntBASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lonrf3Q9D4H7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Paupar-201ENSMUST00000194826 3482 ntBASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gm7851-201ENSMUST00000117574 323 ntBASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gm8199-201ENSMUST00000121323 823 ntBASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gm10051-201ENSMUST00000145209 414 ntBASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Gm1821-202ENSMUST00000227415 750 ntBASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lonrf3Q9D4H7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms