Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Gm2423-201ENSMUST00000074863 733 ntBASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Gm7488-201ENSMUST00000117148 684 ntBASIC12□□□□□ -0.49
Trim42Q9D2H5 Gm14913-201ENSMUST00000120011 1093 ntBASIC12□□□□□ -0.49
Trim42Q9D2H5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Gm38092-201ENSMUST00000195600 653 ntBASIC12□□□□□ -0.49
Trim42Q9D2H5 Gm37497-201ENSMUST00000195830 798 ntBASIC12□□□□□ -0.49
Trim42Q9D2H5 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC12□□□□□ -0.49
Trim42Q9D2H5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12□□□□□ -0.49
Trim42Q9D2H5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim42Q9D2H5 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trim42Q9D2H5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim42Q9D2H5 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12□□□□□ -0.49
Trim42Q9D2H5 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Gm11964-201ENSMUST00000120982 444 ntBASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Gm13366-201ENSMUST00000122198 970 ntBASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Proscos-202ENSMUST00000178990 666 ntBASIC11.99□□□□□ -0.49
Trim42Q9D2H5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Gm8463-201ENSMUST00000208573 613 ntBASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 AC159246.1-201ENSMUST00000214478 249 ntBASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Gm19163-201ENSMUST00000223313 780 ntBASIC11.99□□□□□ -0.49
Trim42Q9D2H5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms