Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Gm13226-201ENSMUST00000117838 404 ntBASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Gm45784-201ENSMUST00000188360 142 ntBASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Gm8420-201ENSMUST00000097103 598 ntBASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.28□□□□□ -0.44
Snf8Q9CZ28 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Rgr-203ENSMUST00000225070 4704 ntBASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Gm11425-201ENSMUST00000119608 498 ntBASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Gm14660-201ENSMUST00000119809 575 ntBASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Gm38241-201ENSMUST00000192641 898 ntBASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Gm9396-201ENSMUST00000076703 567 ntBASIC12.28□□□□□ -0.44
Snf8Q9CZ28 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.28□□□□□ -0.44
Snf8Q9CZ28 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snf8Q9CZ28 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 Gm13316-201ENSMUST00000140537 691 ntBASIC12.27□□□□□ -0.45
Snf8Q9CZ28 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.27□□□□□ -0.45
Snf8Q9CZ28 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snf8Q9CZ28 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms