Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.05□□□□□ -0.64
Trim13Q9CYB0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Gm22331-201ENSMUST00000158066 136 ntBASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Gm44958-201ENSMUST00000203734 736 ntBASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm12314-201ENSMUST00000118104 538 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm11814-201ENSMUST00000119515 929 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm7029-201ENSMUST00000173226 450 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm8652-201ENSMUST00000181363 964 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim13Q9CYB0 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trim13Q9CYB0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim13Q9CYB0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms