Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Gm27572-201ENSMUST00000183702 255 ntBASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Gm43630-201ENSMUST00000201550 776 ntBASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ddx28Q9CWT6 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Gm24136-201ENSMUST00000083374 165 ntBASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Gm22058-201ENSMUST00000083393 310 ntBASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Gm10478-201ENSMUST00000084451 396 ntBASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.23□□□□□ -0.61
Ddx28Q9CWT6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Gm13315-201ENSMUST00000120376 991 ntBASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.22□□□□□ -0.61
Ddx28Q9CWT6 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms