Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1aQ9CU62 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm28450-201ENSMUST00000187349 638 ntBASIC13.41□□□□□ -0.26
Smc1aQ9CU62 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1aQ9CU62 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Gm13736-201ENSMUST00000119272 253 ntBASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Gm12291-201ENSMUST00000121627 311 ntBASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Gm27023-201ENSMUST00000182372 285 ntBASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Gm43378-201ENSMUST00000199336 582 ntBASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.4□□□□□ -0.26
Smc1aQ9CU62 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms