Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Gm12036-201ENSMUST00000120008 530 ntBASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Gm37171-201ENSMUST00000192636 1185 ntBASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTRAFQ9CQE8 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Gm11439-201ENSMUST00000118598 409 ntBASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Gm27306-201ENSMUST00000183970 107 ntBASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Gm7730-201ENSMUST00000212486 454 ntBASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms