Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm6963-201ENSMUST00000147879 379 ntBASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm27046-201ENSMUST00000182160 463 ntBASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm18893-201ENSMUST00000198416 943 ntBASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm6334-201ENSMUST00000207083 228 ntBASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim11Q99PQ2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Gm14109-201ENSMUST00000118814 309 ntBASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Gm5070-201ENSMUST00000177599 862 ntBASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Gm27516-201ENSMUST00000184237 98 ntBASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim11Q99PQ2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms