Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.71□□□□□ -0.53
Trim16Q99PP9 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.71□□□□□ -0.53
Trim16Q99PP9 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.71□□□□□ -0.53
Trim16Q99PP9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.71□□□□□ -0.53
Trim16Q99PP9 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Gm9083-201ENSMUST00000120423 819 ntBASIC11.71□□□□□ -0.53
Trim16Q99PP9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.71□□□□□ -0.53
Trim16Q99PP9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Gm44364-201ENSMUST00000198368 141 ntBASIC11.71□□□□□ -0.53
Trim16Q99PP9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim16Q99PP9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim16Q99PP9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trim16Q99PP9 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Gm14726-201ENSMUST00000120623 896 ntBASIC11.7□□□□□ -0.54
Trim16Q99PP9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.7□□□□□ -0.54
Trim16Q99PP9 Gm24845-201ENSMUST00000158034 109 ntBASIC11.7□□□□□ -0.54
Trim16Q99PP9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Gm28882-201ENSMUST00000185504 314 ntBASIC11.7□□□□□ -0.54
Trim16Q99PP9 Gm7783-201ENSMUST00000204795 781 ntBASIC11.7□□□□□ -0.54
Trim16Q99PP9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.7□□□□□ -0.54
Trim16Q99PP9 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim16Q99PP9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms