Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm13350-201ENSMUST00000120519 479 ntBASIC12.61□□□□□ -0.39
Usp11Q99K46 Gm37259-201ENSMUST00000193903 849 ntBASIC12.61□□□□□ -0.39
Usp11Q99K46 Gm31256-201ENSMUST00000194705 506 ntBASIC12.61□□□□□ -0.39
Usp11Q99K46 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.61□□□□□ -0.39
Usp11Q99K46 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.61□□□□□ -0.39
Usp11Q99K46 Gm24136-201ENSMUST00000083374 165 ntBASIC12.61□□□□□ -0.39
Usp11Q99K46 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp11Q99K46 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.61□□□□□ -0.39
Usp11Q99K46 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Usp11Q99K46 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.6□□□□□ -0.39
Usp11Q99K46 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.6□□□□□ -0.39
Usp11Q99K46 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Gm23270-201ENSMUST00000104055 131 ntBASIC12.6□□□□□ -0.39
Usp11Q99K46 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Gm14381-201ENSMUST00000122105 414 ntBASIC12.6□□□□□ -0.39
Usp11Q99K46 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.6□□□□□ -0.39
Usp11Q99K46 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Gm28882-201ENSMUST00000185504 314 ntBASIC12.6□□□□□ -0.39
Usp11Q99K46 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp11Q99K46 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.6□□□□□ -0.39
Usp11Q99K46 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Usp11Q99K46 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Usp11Q99K46 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Usp11Q99K46 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp11Q99K46 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Usp11Q99K46 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Usp11Q99K46 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp11Q99K46 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.59□□□□□ -0.39
Usp11Q99K46 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.59□□□□□ -0.39
Usp11Q99K46 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Gm15547-201ENSMUST00000122152 333 ntBASIC12.59□□□□□ -0.39
Usp11Q99K46 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Gm23119-201ENSMUST00000158610 140 ntBASIC12.59□□□□□ -0.39
Usp11Q99K46 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp11Q99K46 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.59□□□□□ -0.39
Usp11Q99K46 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.59□□□□□ -0.39
Usp11Q99K46 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms