Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Gm9192-201ENSMUST00000183221 985 ntBASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Gm44967-201ENSMUST00000207047 631 ntBASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Gm25700-201ENSMUST00000177693 110 ntBASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Gm45224-201ENSMUST00000208203 414 ntBASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb1Q91Y08 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.4□□□□□ -0.43
Pcdhb1Q91Y08 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb1Q91Y08 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb1Q91Y08 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.43
Pcdhb1Q91Y08 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm22133-201ENSMUST00000102082 109 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm15004-201ENSMUST00000119192 630 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm13350-201ENSMUST00000120519 479 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm25668-201ENSMUST00000157700 129 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm7584-201ENSMUST00000175829 940 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm25890-201ENSMUST00000177643 165 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm22614-201ENSMUST00000178300 165 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm22042-201ENSMUST00000082989 165 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm26110-201ENSMUST00000083971 165 ntBASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms