Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Gm13297-201ENSMUST00000120205 934 ntBASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Gm6334-201ENSMUST00000207083 228 ntBASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Gm13736-201ENSMUST00000119272 253 ntBASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc87Q8CDL9 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Gm13316-201ENSMUST00000140537 691 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Gm2991-201ENSMUST00000173338 480 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Gm9136-201ENSMUST00000193368 454 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Gm39404-201ENSMUST00000216350 313 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Cts7-204ENSMUST00000225321 1257 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc87Q8CDL9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms