Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Gm15711-201ENSMUST00000118889 535 ntBASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Gm28450-201ENSMUST00000187349 638 ntBASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Gm17931-201ENSMUST00000208132 634 ntBASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Gm19208-201ENSMUST00000213861 912 ntBASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Aph1aQ8BVF7 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Gm4157-201ENSMUST00000211647 679 ntBASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Aph1aQ8BVF7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Gm26286-201ENSMUST00000104166 134 ntBASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Gm12380-201ENSMUST00000119012 544 ntBASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Gm12036-201ENSMUST00000120008 530 ntBASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Gm12266-201ENSMUST00000120311 962 ntBASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Aph1aQ8BVF7 Gm7003-201ENSMUST00000195089 312 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms