Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Rmrp-201ENSMUST00000157463 271 ntBASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh20Q8BIZ0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.67□□□□□ -0.54
Pcdh20Q8BIZ0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Gm23270-201ENSMUST00000104055 131 ntBASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Mir877-201ENSMUST00000104738 85 ntBASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Gm11930-201ENSMUST00000117788 190 ntBASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.66□□□□□ -0.54
Pcdh20Q8BIZ0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms