Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Gm24830-201ENSMUST00000102024 166 ntBASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Gm27572-201ENSMUST00000183702 255 ntBASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Gm6013-201ENSMUST00000212264 699 ntBASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Gm26232-201ENSMUST00000083360 166 ntBASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm28882-201ENSMUST00000185504 314 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm37489-201ENSMUST00000191883 159 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm42937-201ENSMUST00000197360 752 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Olfr284-202ENSMUST00000206647 966 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm5186-201ENSMUST00000218781 920 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm10478-201ENSMUST00000084451 396 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 BC043934-202ENSMUST00000185694 2356 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.53□□□□□ -0.4
Ccdc40Q8BI79 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc40Q8BI79 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc40Q8BI79 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc40Q8BI79 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.52□□□□□ -0.41
Ccdc40Q8BI79 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc40Q8BI79 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc40Q8BI79 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.52□□□□□ -0.41
Ccdc40Q8BI79 Gm23912-201ENSMUST00000104687 87 ntBASIC12.52□□□□□ -0.41
Ccdc40Q8BI79 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc40Q8BI79 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms