Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.18■□□□□ 0.02
Shank2Q80Z38 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank2Q80Z38 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Gm13094-201ENSMUST00000117930 409 ntBASIC15.18■□□□□ 0.02
Shank2Q80Z38 Gm12418-201ENSMUST00000118116 942 ntBASIC15.18■□□□□ 0.02
Shank2Q80Z38 Gm14165-201ENSMUST00000121456 952 ntBASIC15.18■□□□□ 0.02
Shank2Q80Z38 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Gm23694-201ENSMUST00000179335 110 ntBASIC15.18■□□□□ 0.02
Shank2Q80Z38 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC15.18■□□□□ 0.02
Shank2Q80Z38 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Gm8384-201ENSMUST00000190905 704 ntBASIC15.18■□□□□ 0.02
Shank2Q80Z38 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC15.18■□□□□ 0.02
Shank2Q80Z38 Gm45310-201ENSMUST00000210436 275 ntBASIC15.18■□□□□ 0.02
Shank2Q80Z38 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC15.18■□□□□ 0.02
Shank2Q80Z38 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank2Q80Z38 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Rab3c-202ENSMUST00000223922 2398 ntBASIC15.17■□□□□ 0.02
Shank2Q80Z38 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Gm12337-201ENSMUST00000119634 400 ntBASIC15.17■□□□□ 0.02
Shank2Q80Z38 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Mir7035-201ENSMUST00000184713 82 ntBASIC15.17■□□□□ 0.02
Shank2Q80Z38 Gm35960-201ENSMUST00000202712 767 ntBASIC15.17■□□□□ 0.02
Shank2Q80Z38 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 CT030170.2-201ENSMUST00000223267 126 ntBASIC15.17■□□□□ 0.02
Shank2Q80Z38 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Shank2Q80Z38 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.16■□□□□ 0.02
Shank2Q80Z38 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Gm18123-201ENSMUST00000210874 822 ntBASIC15.16■□□□□ 0.02
Shank2Q80Z38 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Capsl-202ENSMUST00000226688 739 ntBASIC15.16■□□□□ 0.02
Shank2Q80Z38 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Gm9791-201ENSMUST00000060997 447 ntBASIC15.16■□□□□ 0.02
Shank2Q80Z38 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shank2Q80Z38 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank2Q80Z38 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank2Q80Z38 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC15.15■□□□□ 0.02
Shank2Q80Z38 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.15■□□□□ 0.02
Shank2Q80Z38 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms