Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm13182-201ENSMUST00000122241 312 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm12407-201ENSMUST00000180219 324 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm42657-201ENSMUST00000201746 211 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm17931-201ENSMUST00000208132 634 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm2875-201ENSMUST00000211333 360 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp6nlQ80XC3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gm25076-201ENSMUST00000104098 132 ntBASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gm14942-201ENSMUST00000119642 336 ntBASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gm13937-201ENSMUST00000121000 988 ntBASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gm3150-201ENSMUST00000166418 204 ntBASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gm44158-201ENSMUST00000203881 505 ntBASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.2□□□□□ -0.3
Usp6nlQ80XC3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms