Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Rpp38Q80UU2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm12380-201ENSMUST00000119012 544 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm11700-201ENSMUST00000119409 403 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm11960-201ENSMUST00000122068 925 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Mir7677-201ENSMUST00000184226 67 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm28071-201ENSMUST00000190355 478 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm4857-201ENSMUST00000192718 785 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm45186-201ENSMUST00000206874 478 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm9797-202ENSMUST00000218003 294 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Gm26448-201ENSMUST00000082446 203 ntBASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpp38Q80UU2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Gm6450-201ENSMUST00000200896 574 ntBASIC11.92□□□□□ -0.5
Rpp38Q80UU2 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpp38Q80UU2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms