Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm15515-201ENSMUST00000117827 822 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm7722-201ENSMUST00000120646 741 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm23699-201ENSMUST00000158835 135 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Mir7677-201ENSMUST00000184226 67 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm18038-201ENSMUST00000197900 485 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm5455-201ENSMUST00000058710 715 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Slc46a1Q6PEM8 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Gm37744-201ENSMUST00000194616 1590 ntBASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Gm9062-201ENSMUST00000117712 727 ntBASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Gm11450-201ENSMUST00000121144 333 ntBASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Gm22334-201ENSMUST00000158070 133 ntBASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Mir1943-201ENSMUST00000158276 73 ntBASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Gm42790-201ENSMUST00000201268 969 ntBASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc46a1Q6PEM8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc46a1Q6PEM8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc46a1Q6PEM8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc46a1Q6PEM8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Slc46a1Q6PEM8 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.56□□□□□ -0.72
Slc46a1Q6PEM8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc46a1Q6PEM8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc46a1Q6PEM8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc46a1Q6PEM8 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms