Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Auts2-212ENSMUST00000178555 309 ntBASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf220Q6PDX6 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Gm8213-201ENSMUST00000118191 441 ntBASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Gm5866-201ENSMUST00000177881 973 ntBASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms