Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim37Q6PCX9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trim37Q6PCX9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim37Q6PCX9 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.37□□□□□ -0.27
Trim37Q6PCX9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim37Q6PCX9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trim37Q6PCX9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim37Q6PCX9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim37Q6PCX9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Gm5621-201ENSMUST00000187303 640 ntBASIC13.36□□□□□ -0.27
Trim37Q6PCX9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Gm8325-201ENSMUST00000099086 453 ntBASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trim37Q6PCX9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.35□□□□□ -0.27
Trim37Q6PCX9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Gm7851-201ENSMUST00000117574 323 ntBASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Gm28882-201ENSMUST00000185504 314 ntBASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim37Q6PCX9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim37Q6PCX9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms