Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm11949-201ENSMUST00000117640 372 ntBASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm11836-201ENSMUST00000121022 441 ntBASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm4654-201ENSMUST00000183305 982 ntBASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm43186-201ENSMUST00000198130 824 ntBASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.01□□□□□ -0.17
Krt40Q6IFX3 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt40Q6IFX3 Gm18198-201ENSMUST00000204986 1551 ntBASIC14□□□□□ -0.17
Krt40Q6IFX3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Gm45199-201ENSMUST00000207640 1507 ntBASIC14□□□□□ -0.17
Krt40Q6IFX3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Krt40Q6IFX3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Krt40Q6IFX3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14□□□□□ -0.17
Krt40Q6IFX3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14□□□□□ -0.17
Krt40Q6IFX3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14□□□□□ -0.17
Krt40Q6IFX3 Gm21092-201ENSMUST00000178995 955 ntBASIC14□□□□□ -0.17
Krt40Q6IFX3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Krt40Q6IFX3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14□□□□□ -0.17
Krt40Q6IFX3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14□□□□□ -0.17
Krt40Q6IFX3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14□□□□□ -0.17
Krt40Q6IFX3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14□□□□□ -0.17
Krt40Q6IFX3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Krt40Q6IFX3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14□□□□□ -0.17
Krt40Q6IFX3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14□□□□□ -0.17
Krt40Q6IFX3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Krt40Q6IFX3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt40Q6IFX3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt40Q6IFX3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.99□□□□□ -0.17
Krt40Q6IFX3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Gm11667-201ENSMUST00000119828 486 ntBASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.99□□□□□ -0.17
Krt40Q6IFX3 Gm26047-201ENSMUST00000157308 113 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms