Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm5939-201ENSMUST00000119613 2874 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm25317-201ENSMUST00000116824 129 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm13492-201ENSMUST00000119772 665 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm11591-201ENSMUST00000120063 702 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm26083-201ENSMUST00000157904 193 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm25971-201ENSMUST00000158953 286 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm17075-201ENSMUST00000171924 670 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm6334-201ENSMUST00000207083 228 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Foxc1Q61572 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC9.13□□□□□ -0.95
Foxc1Q61572 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Foxc1Q61572 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.13□□□□□ -0.95
Foxc1Q61572 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.13□□□□□ -0.95
Foxc1Q61572 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms