Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm9136-201ENSMUST00000193368 454 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm43630-201ENSMUST00000201550 776 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm17931-201ENSMUST00000208132 634 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm45865-201ENSMUST00000211815 945 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm15610-201ENSMUST00000120584 195 ntBASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm12164-201ENSMUST00000121695 551 ntBASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm9230-201ENSMUST00000188228 532 ntBASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm38266-201ENSMUST00000194931 421 ntBASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5d-4Q5R1F6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms