Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm14193-201ENSMUST00000105067 153 ntBASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm12579-201ENSMUST00000118040 783 ntBASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm22144-201ENSMUST00000157402 102 ntBASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm19459-201ENSMUST00000176240 835 ntBASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm6450-201ENSMUST00000200896 574 ntBASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm43916-201ENSMUST00000205062 967 ntBASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38aQ4FK66 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Gm8731-201ENSMUST00000118088 412 ntBASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Gm15881-201ENSMUST00000148792 942 ntBASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Gm9192-201ENSMUST00000183221 985 ntBASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Gm42599-201ENSMUST00000201308 469 ntBASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Prpf38aQ4FK66 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm15573-201ENSMUST00000119487 540 ntBASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm11956-201ENSMUST00000119525 512 ntBASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm17391-201ENSMUST00000171036 126 ntBASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm29499-201ENSMUST00000189151 486 ntBASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm28329-201ENSMUST00000191208 689 ntBASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm29171-201ENSMUST00000191397 486 ntBASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm5051-201ENSMUST00000204085 485 ntBASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf38aQ4FK66 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms