Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm12164-201ENSMUST00000121695 551 ntBASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm6963-201ENSMUST00000147879 379 ntBASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm5070-201ENSMUST00000177599 862 ntBASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.25□□□□□ -0.61
Brf2Q3UAW9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.25□□□□□ -0.61
Brf2Q3UAW9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gzmn-202ENSMUST00000225535 989 ntBASIC11.25□□□□□ -0.61
Brf2Q3UAW9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Brf2Q3UAW9 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms