Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm11509-201ENSMUST00000117358 325 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm12792-201ENSMUST00000117669 1019 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm11663-201ENSMUST00000117888 290 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Cfhr3-201ENSMUST00000170441 1022 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Mir8093-201ENSMUST00000185043 137 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm9023-201ENSMUST00000198408 1038 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm18748-201ENSMUST00000198507 622 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm42723-201ENSMUST00000199966 1044 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm5455-201ENSMUST00000058710 715 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.06□□□□□ -0.48
Col9a1Q05722 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a1Q05722 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col9a1Q05722 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm25053-201ENSMUST00000103982 133 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm25922-201ENSMUST00000104281 130 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm12663-201ENSMUST00000118481 958 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm24679-201ENSMUST00000158762 111 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm8343-201ENSMUST00000182705 994 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Ighv5-1-201ENSMUST00000193324 353 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm6606-201ENSMUST00000193613 947 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms