Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Gm43378-201ENSMUST00000199336 582 ntBASIC11.35□□□□□ -0.59
Nkx3-2P97503 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.35□□□□□ -0.59
Nkx3-2P97503 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.35□□□□□ -0.59
Nkx3-2P97503 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.35□□□□□ -0.59
Nkx3-2P97503 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.35□□□□□ -0.59
Nkx3-2P97503 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Gm9630-201ENSMUST00000178304 885 ntBASIC11.34□□□□□ -0.59
Nkx3-2P97503 Mir6979-201ENSMUST00000183927 56 ntBASIC11.34□□□□□ -0.59
Nkx3-2P97503 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Gm7848-201ENSMUST00000210739 718 ntBASIC11.34□□□□□ -0.59
Nkx3-2P97503 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.34□□□□□ -0.59
Nkx3-2P97503 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx3-2P97503 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Nkx3-2P97503 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Nkx3-2P97503 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Nkx3-2P97503 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Gm23912-201ENSMUST00000104687 87 ntBASIC11.33□□□□□ -0.6
Nkx3-2P97503 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 B9d1os-201ENSMUST00000137010 674 ntBASIC11.33□□□□□ -0.6
Nkx3-2P97503 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.33□□□□□ -0.6
Nkx3-2P97503 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Gm5455-201ENSMUST00000058710 715 ntBASIC11.33□□□□□ -0.6
Nkx3-2P97503 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms