Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Npas1P97459 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Npas1P97459 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Npas1P97459 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Npas1P97459 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Npas1P97459 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Npas1P97459 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Npas1P97459 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Npas1P97459 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.02□□□□□ -0.81
Npas1P97459 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.02□□□□□ -0.81
Npas1P97459 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.02□□□□□ -0.81
Npas1P97459 Gm10156-201ENSMUST00000122364 462 ntBASIC10.02□□□□□ -0.81
Npas1P97459 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Npas1P97459 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.02□□□□□ -0.81
Npas1P97459 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.02□□□□□ -0.81
Npas1P97459 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.02□□□□□ -0.81
Npas1P97459 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.02□□□□□ -0.81
Npas1P97459 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Npas1P97459 Rims2-204ENSMUST00000226410 3685 ntBASIC10.02□□□□□ -0.81
Npas1P97459 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.02□□□□□ -0.81
Npas1P97459 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Npas1P97459 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Npas1P97459 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.02□□□□□ -0.81
Npas1P97459 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Npas1P97459 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Npas1P97459 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Npas1P97459 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.01□□□□□ -0.81
Npas1P97459 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
Npas1P97459 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.01□□□□□ -0.81
Npas1P97459 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Npas1P97459 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Npas1P97459 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Npas1P97459 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Gm11803-201ENSMUST00000119966 444 ntBASIC10.01□□□□□ -0.81
Npas1P97459 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.01□□□□□ -0.81
Npas1P97459 Gm12363-201ENSMUST00000122250 668 ntBASIC10.01□□□□□ -0.81
Npas1P97459 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.01□□□□□ -0.81
Npas1P97459 Gm26185-201ENSMUST00000157692 266 ntBASIC10.01□□□□□ -0.81
Npas1P97459 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Gm8810-201ENSMUST00000172895 754 ntBASIC10.01□□□□□ -0.81
Npas1P97459 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Npas1P97459 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.01□□□□□ -0.81
Npas1P97459 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.01□□□□□ -0.81
Npas1P97459 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Npas1P97459 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.01□□□□□ -0.81
Npas1P97459 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Npas1P97459 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms