Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lig3P97386 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Lig3P97386 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lig3P97386 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lig3P97386 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lig3P97386 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lig3P97386 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lig3P97386 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lig3P97386 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lig3P97386 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lig3P97386 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.13□□□□□ -0.31
Lig3P97386 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
Lig3P97386 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lig3P97386 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Lig3P97386 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lig3P97386 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.12□□□□□ -0.31
Lig3P97386 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.12□□□□□ -0.31
Lig3P97386 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.12□□□□□ -0.31
Lig3P97386 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.12□□□□□ -0.31
Lig3P97386 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.12□□□□□ -0.31
Lig3P97386 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.12□□□□□ -0.31
Lig3P97386 Gm37666-201ENSMUST00000194110 866 ntBASIC13.12□□□□□ -0.31
Lig3P97386 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.12□□□□□ -0.31
Lig3P97386 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lig3P97386 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lig3P97386 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.12□□□□□ -0.31
Lig3P97386 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.12□□□□□ -0.31
Lig3P97386 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.12□□□□□ -0.31
Lig3P97386 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Lig3P97386 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.12□□□□□ -0.31
Lig3P97386 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.12□□□□□ -0.31
Lig3P97386 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.12□□□□□ -0.31
Lig3P97386 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lig3P97386 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.11□□□□□ -0.31
Lig3P97386 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.11□□□□□ -0.31
Lig3P97386 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.11□□□□□ -0.31
Lig3P97386 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Lig3P97386 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Lig3P97386 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.11□□□□□ -0.31
Lig3P97386 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.11□□□□□ -0.31
Lig3P97386 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.11□□□□□ -0.31
Lig3P97386 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Gm32999-201ENSMUST00000192693 562 ntBASIC13.11□□□□□ -0.31
Lig3P97386 Gm38092-201ENSMUST00000195600 653 ntBASIC13.11□□□□□ -0.31
Lig3P97386 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.11□□□□□ -0.31
Lig3P97386 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Lig3P97386 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.11□□□□□ -0.31
Lig3P97386 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.11□□□□□ -0.31
Lig3P97386 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Lig3P97386 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Gm37368-201ENSMUST00000193173 3212 ntBASIC13.11□□□□□ -0.31
Lig3P97386 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.11□□□□□ -0.31
Lig3P97386 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Lig3P97386 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms