Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Shox2P70390 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Shox2P70390 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Shox2P70390 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Shox2P70390 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shox2P70390 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.77□□□□□ -0.52
Shox2P70390 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.77□□□□□ -0.52
Shox2P70390 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Shox2P70390 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Shox2P70390 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shox2P70390 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shox2P70390 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shox2P70390 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shox2P70390 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.77□□□□□ -0.53
Shox2P70390 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Shox2P70390 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.77□□□□□ -0.53
Shox2P70390 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.77□□□□□ -0.53
Shox2P70390 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Shox2P70390 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Shox2P70390 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Gm19163-201ENSMUST00000223313 780 ntBASIC11.77□□□□□ -0.53
Shox2P70390 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Shox2P70390 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.77□□□□□ -0.53
Shox2P70390 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.77□□□□□ -0.53
Shox2P70390 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Shox2P70390 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Shox2P70390 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Shox2P70390 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Shox2P70390 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shox2P70390 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Shox2P70390 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Shox2P70390 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Shox2P70390 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Shox2P70390 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.76□□□□□ -0.53
Shox2P70390 Gm12928-201ENSMUST00000117115 573 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Gm13612-201ENSMUST00000119276 390 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.76□□□□□ -0.53
Shox2P70390 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Gm27989-201ENSMUST00000184721 107 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.76□□□□□ -0.53
Shox2P70390 Gm18711-201ENSMUST00000199341 750 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Shox2P70390 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.76□□□□□ -0.53
Shox2P70390 Gm5781-201ENSMUST00000219792 443 ntBASIC11.76□□□□□ -0.53
Shox2P70390 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.76□□□□□ -0.53
Shox2P70390 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.76□□□□□ -0.53
Shox2P70390 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.76□□□□□ -0.53
Shox2P70390 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Shox2P70390 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Shox2P70390 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.76□□□□□ -0.53
Shox2P70390 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Shox2P70390 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms