Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pdlim4P70271 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Pdlim4P70271 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pdlim4P70271 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pdlim4P70271 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.98□□□□□ -0.81
Pdlim4P70271 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Gm11989-201ENSMUST00000117240 672 ntBASIC9.98□□□□□ -0.81
Pdlim4P70271 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Gm11362-201ENSMUST00000118838 850 ntBASIC9.98□□□□□ -0.81
Pdlim4P70271 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Rprl1-202ENSMUST00000198476 238 ntBASIC9.98□□□□□ -0.81
Pdlim4P70271 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Gm19187-201ENSMUST00000206781 892 ntBASIC9.98□□□□□ -0.81
Pdlim4P70271 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.98□□□□□ -0.81
Pdlim4P70271 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.98□□□□□ -0.81
Pdlim4P70271 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.98□□□□□ -0.81
Pdlim4P70271 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pdlim4P70271 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Mir877-201ENSMUST00000104738 85 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm14644-201ENSMUST00000116671 647 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm13296-201ENSMUST00000117854 997 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.97□□□□□ -0.81
Pdlim4P70271 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm26361-201ENSMUST00000158868 186 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm32999-201ENSMUST00000192693 562 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 AA914427-201ENSMUST00000193194 1166 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm18711-201ENSMUST00000199341 750 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pdlim4P70271 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.97□□□□□ -0.81
Pdlim4P70271 Gm45598-202ENSMUST00000210719 986 ntBASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms