Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.2□□□□□ -0.3
Hmgb1P63158 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Hmgb1P63158 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.19□□□□□ -0.3
Hmgb1P63158 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.19□□□□□ -0.3
Hmgb1P63158 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Gm26956-201ENSMUST00000182176 986 ntBASIC13.19□□□□□ -0.3
Hmgb1P63158 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmgb1P63158 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.19□□□□□ -0.3
Hmgb1P63158 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgb1P63158 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.19□□□□□ -0.3
Hmgb1P63158 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gm13297-201ENSMUST00000120205 934 ntBASIC13.18□□□□□ -0.3
Hmgb1P63158 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gm17931-201ENSMUST00000208132 634 ntBASIC13.18□□□□□ -0.3
Hmgb1P63158 Gm6013-201ENSMUST00000212264 699 ntBASIC13.18□□□□□ -0.3
Hmgb1P63158 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.18□□□□□ -0.3
Hmgb1P63158 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Gm42449-201ENSMUST00000200349 2258 ntBASIC13.18□□□□□ -0.3
Hmgb1P63158 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hmgb1P63158 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgb1P63158 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms