Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm37793-201ENSMUST00000195548 695 ntBASIC15.07■□□□□ 0
Msh6P54276 Gm17889-201ENSMUST00000198410 598 ntBASIC15.07■□□□□ 0
Msh6P54276 AC156501.1-201ENSMUST00000228219 270 ntBASIC15.07■□□□□ 0
Msh6P54276 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Msh6P54276 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Msh6P54276 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.07■□□□□ 0
Msh6P54276 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Msh6P54276 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.06■□□□□ 0
Msh6P54276 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Msh6P54276 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Msh6P54276 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Msh6P54276 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Msh6P54276 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.06■□□□□ 0
Msh6P54276 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Msh6P54276 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.06■□□□□ 0
Msh6P54276 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC15.06■□□□□ 0
Msh6P54276 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Gm29410-201ENSMUST00000188383 694 ntBASIC15.06■□□□□ 0
Msh6P54276 Gm5298-201ENSMUST00000201122 892 ntBASIC15.06■□□□□ 0
Msh6P54276 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC15.06■□□□□ 0
Msh6P54276 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Msh6P54276 Gm8325-201ENSMUST00000099086 453 ntBASIC15.06■□□□□ 0
Msh6P54276 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC15.06■□□□□ 0
Msh6P54276 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ 0
Msh6P54276 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Msh6P54276 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Msh6P54276 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.05■□□□□ 0
Msh6P54276 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.05■□□□□ 0
Msh6P54276 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.05■□□□□ -0
Msh6P54276 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Msh6P54276 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
Msh6P54276 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.05■□□□□ -0
Msh6P54276 Gm11980-201ENSMUST00000121445 986 ntBASIC15.05■□□□□ -0
Msh6P54276 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC15.05■□□□□ -0
Msh6P54276 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Gm38151-201ENSMUST00000195085 289 ntBASIC15.05■□□□□ -0
Msh6P54276 Gm6450-201ENSMUST00000200896 574 ntBASIC15.05■□□□□ -0
Msh6P54276 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Msh6P54276 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Gm8342-201ENSMUST00000209839 757 ntBASIC15.05■□□□□ -0
Msh6P54276 Gm2553-201ENSMUST00000215986 605 ntBASIC15.05■□□□□ -0
Msh6P54276 Gm9111-201ENSMUST00000219394 709 ntBASIC15.05■□□□□ -0
Msh6P54276 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.05■□□□□ -0
Msh6P54276 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.05■□□□□ -0
Msh6P54276 Gm23680-201ENSMUST00000083162 164 ntBASIC15.05■□□□□ -0
Msh6P54276 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC15.05■□□□□ -0
Msh6P54276 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Msh6P54276 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.04■□□□□ -0
Msh6P54276 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms