Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.08□□□□□ -0.48
Lhx3P50481 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.08□□□□□ -0.48
Lhx3P50481 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.08□□□□□ -0.48
Lhx3P50481 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Gm23699-201ENSMUST00000158835 135 ntBASIC12.08□□□□□ -0.48
Lhx3P50481 Mir6979-201ENSMUST00000183927 56 ntBASIC12.08□□□□□ -0.48
Lhx3P50481 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.08□□□□□ -0.48
Lhx3P50481 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Lhx3P50481 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lhx3P50481 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.08□□□□□ -0.48
Lhx3P50481 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Lhx3P50481 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.08□□□□□ -0.48
Lhx3P50481 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.08□□□□□ -0.48
Lhx3P50481 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lhx3P50481 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lhx3P50481 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lhx3P50481 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Lhx3P50481 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Lhx3P50481 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.08□□□□□ -0.48
Lhx3P50481 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.08□□□□□ -0.48
Lhx3P50481 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lhx3P50481 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lhx3P50481 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.07□□□□□ -0.48
Lhx3P50481 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lhx3P50481 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Gm12579-201ENSMUST00000118040 783 ntBASIC12.07□□□□□ -0.48
Lhx3P50481 Gm13263-201ENSMUST00000121271 838 ntBASIC12.07□□□□□ -0.48
Lhx3P50481 Gm11960-201ENSMUST00000122068 925 ntBASIC12.07□□□□□ -0.48
Lhx3P50481 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lhx3P50481 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lhx3P50481 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.07□□□□□ -0.48
Lhx3P50481 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.07□□□□□ -0.48
Lhx3P50481 Gm37246-201ENSMUST00000192665 835 ntBASIC12.07□□□□□ -0.48
Lhx3P50481 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lhx3P50481 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Lhx3P50481 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.07□□□□□ -0.48
Lhx3P50481 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.07□□□□□ -0.48
Lhx3P50481 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.07□□□□□ -0.48
Lhx3P50481 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Lhx3P50481 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lhx3P50481 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lhx3P50481 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx3P50481 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx3P50481 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx3P50481 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx3P50481 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx3P50481 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms