Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm14301-201ENSMUST00000120181 324 ntBASIC14.17□□□□□ -0.14
LtbrP50284 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.17□□□□□ -0.14
LtbrP50284 Gm11354-201ENSMUST00000121974 422 ntBASIC14.17□□□□□ -0.14
LtbrP50284 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.17□□□□□ -0.14
LtbrP50284 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
LtbrP50284 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.17□□□□□ -0.14
LtbrP50284 Gm8343-201ENSMUST00000182705 994 ntBASIC14.17□□□□□ -0.14
LtbrP50284 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 Gm44607-201ENSMUST00000205611 1090 ntBASIC14.17□□□□□ -0.14
LtbrP50284 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.17□□□□□ -0.14
LtbrP50284 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.17□□□□□ -0.14
LtbrP50284 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.17□□□□□ -0.14
LtbrP50284 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LtbrP50284 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LtbrP50284 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LtbrP50284 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LtbrP50284 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LtbrP50284 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LtbrP50284 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.16□□□□□ -0.14
LtbrP50284 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Gm8737-201ENSMUST00000122208 642 ntBASIC14.16□□□□□ -0.14
LtbrP50284 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.16□□□□□ -0.14
LtbrP50284 Gm23045-201ENSMUST00000175041 96 ntBASIC14.16□□□□□ -0.14
LtbrP50284 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC14.16□□□□□ -0.14
LtbrP50284 Gm17877-201ENSMUST00000192578 814 ntBASIC14.16□□□□□ -0.14
LtbrP50284 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.16□□□□□ -0.14
LtbrP50284 Gm18463-201ENSMUST00000207258 474 ntBASIC14.16□□□□□ -0.14
LtbrP50284 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.16□□□□□ -0.14
LtbrP50284 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LtbrP50284 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Gm42479-201ENSMUST00000198654 1356 ntBASIC14.16□□□□□ -0.14
LtbrP50284 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LtbrP50284 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LtbrP50284 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LtbrP50284 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.16□□□□□ -0.14
LtbrP50284 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LtbrP50284 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.15□□□□□ -0.14
LtbrP50284 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.15□□□□□ -0.14
LtbrP50284 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Gm26013-201ENSMUST00000104404 119 ntBASIC14.15□□□□□ -0.14
LtbrP50284 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.15□□□□□ -0.14
LtbrP50284 Gm15352-201ENSMUST00000118696 270 ntBASIC14.15□□□□□ -0.14
LtbrP50284 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.15□□□□□ -0.14
LtbrP50284 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.15□□□□□ -0.14
LtbrP50284 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LtbrP50284 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.15□□□□□ -0.14
LtbrP50284 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.15□□□□□ -0.14
LtbrP50284 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LtbrP50284 Gm43186-201ENSMUST00000198130 824 ntBASIC14.15□□□□□ -0.14
LtbrP50284 Gm42516-201ENSMUST00000198691 767 ntBASIC14.15□□□□□ -0.14
LtbrP50284 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
LtbrP50284 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.15□□□□□ -0.14
LtbrP50284 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
LtbrP50284 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.15□□□□□ -0.14
LtbrP50284 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LtbrP50284 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.15□□□□□ -0.14
LtbrP50284 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.15□□□□□ -0.14
LtbrP50284 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LtbrP50284 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms