Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.81□□□□□ -0.68
Rfx3P48381 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Rfx3P48381 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.81□□□□□ -0.68
Rfx3P48381 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.81□□□□□ -0.68
Rfx3P48381 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm26232-201ENSMUST00000083360 166 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Rfx3P48381 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.81□□□□□ -0.68
Rfx3P48381 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 BC043934-202ENSMUST00000185694 2356 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Rfx3P48381 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Rfx3P48381 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.81□□□□□ -0.68
Rfx3P48381 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.81□□□□□ -0.68
Rfx3P48381 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rfx3P48381 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rfx3P48381 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Rfx3P48381 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rfx3P48381 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Rfx3P48381 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.8□□□□□ -0.68
Rfx3P48381 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Rfx3P48381 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Rfx3P48381 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.8□□□□□ -0.68
Rfx3P48381 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.8□□□□□ -0.68
Rfx3P48381 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.8□□□□□ -0.68
Rfx3P48381 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.8□□□□□ -0.68
Rfx3P48381 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Rfx3P48381 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rfx3P48381 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rfx3P48381 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.8□□□□□ -0.68
Rfx3P48381 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rfx3P48381 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.8□□□□□ -0.68
Rfx3P48381 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rfx3P48381 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rfx3P48381 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rfx3P48381 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Gm24934-201ENSMUST00000103764 111 ntBASIC10.79□□□□□ -0.68
Rfx3P48381 Gm23912-201ENSMUST00000104687 87 ntBASIC10.79□□□□□ -0.68
Rfx3P48381 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.79□□□□□ -0.68
Rfx3P48381 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.79□□□□□ -0.68
Rfx3P48381 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.79□□□□□ -0.68
Rfx3P48381 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rfx3P48381 Gm28882-201ENSMUST00000185504 314 ntBASIC10.79□□□□□ -0.68
Rfx3P48381 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Rfx3P48381 Gm38158-201ENSMUST00000194617 339 ntBASIC10.79□□□□□ -0.68
Rfx3P48381 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.79□□□□□ -0.68
Rfx3P48381 Gm42937-201ENSMUST00000197360 752 ntBASIC10.79□□□□□ -0.68
Rfx3P48381 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.79□□□□□ -0.68
Rfx3P48381 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms