Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.81□□□□□ -0.84
VhlP40338 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.81□□□□□ -0.84
VhlP40338 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
VhlP40338 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.8□□□□□ -0.84
VhlP40338 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
VhlP40338 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.8□□□□□ -0.84
VhlP40338 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Gm15824-201ENSMUST00000119516 955 ntBASIC9.8□□□□□ -0.84
VhlP40338 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.8□□□□□ -0.84
VhlP40338 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Gm27847-201ENSMUST00000183711 107 ntBASIC9.8□□□□□ -0.84
VhlP40338 Gm27375-201ENSMUST00000183799 107 ntBASIC9.8□□□□□ -0.84
VhlP40338 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.8□□□□□ -0.84
VhlP40338 Gm43002-201ENSMUST00000200310 155 ntBASIC9.8□□□□□ -0.84
VhlP40338 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.8□□□□□ -0.84
VhlP40338 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.8□□□□□ -0.84
VhlP40338 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.8□□□□□ -0.84
VhlP40338 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.8□□□□□ -0.84
VhlP40338 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.8□□□□□ -0.84
VhlP40338 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.8□□□□□ -0.84
VhlP40338 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.8□□□□□ -0.84
VhlP40338 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.8□□□□□ -0.84
VhlP40338 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.8□□□□□ -0.84
VhlP40338 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.8□□□□□ -0.84
VhlP40338 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.8□□□□□ -0.84
VhlP40338 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.8□□□□□ -0.84
VhlP40338 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
VhlP40338 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
VhlP40338 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.8□□□□□ -0.84
VhlP40338 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VhlP40338 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.8□□□□□ -0.84
VhlP40338 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
VhlP40338 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.79□□□□□ -0.84
VhlP40338 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
VhlP40338 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.79□□□□□ -0.84
VhlP40338 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
VhlP40338 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
VhlP40338 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.79□□□□□ -0.84
VhlP40338 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Gm14999-201ENSMUST00000121039 624 ntBASIC9.79□□□□□ -0.84
VhlP40338 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.79□□□□□ -0.84
VhlP40338 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
VhlP40338 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.79□□□□□ -0.84
VhlP40338 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
VhlP40338 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Gm8738-201ENSMUST00000172606 329 ntBASIC9.79□□□□□ -0.84
VhlP40338 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC9.79□□□□□ -0.84
VhlP40338 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms