Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm7722-201ENSMUST00000120646 741 ntBASIC13.11□□□□□ -0.31
Pde6bP23440 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.11□□□□□ -0.31
Pde6bP23440 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.11□□□□□ -0.31
Pde6bP23440 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.11□□□□□ -0.31
Pde6bP23440 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pde6bP23440 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.11□□□□□ -0.31
Pde6bP23440 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pde6bP23440 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Gm8100-201ENSMUST00000182906 988 ntBASIC13.11□□□□□ -0.31
Pde6bP23440 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.11□□□□□ -0.31
Pde6bP23440 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.11□□□□□ -0.31
Pde6bP23440 Gm18711-201ENSMUST00000199341 750 ntBASIC13.11□□□□□ -0.31
Pde6bP23440 Gm4607-201ENSMUST00000206649 577 ntBASIC13.11□□□□□ -0.31
Pde6bP23440 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pde6bP23440 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.11□□□□□ -0.31
Pde6bP23440 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.11□□□□□ -0.31
Pde6bP23440 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pde6bP23440 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pde6bP23440 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6bP23440 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pde6bP23440 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.1□□□□□ -0.31
Pde6bP23440 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Pde6bP23440 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.1□□□□□ -0.31
Pde6bP23440 Gm23912-201ENSMUST00000104687 87 ntBASIC13.1□□□□□ -0.31
Pde6bP23440 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Gm12857-201ENSMUST00000117678 592 ntBASIC13.1□□□□□ -0.31
Pde6bP23440 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.1□□□□□ -0.31
Pde6bP23440 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.1□□□□□ -0.31
Pde6bP23440 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.1□□□□□ -0.31
Pde6bP23440 Gm44126-201ENSMUST00000204831 514 ntBASIC13.1□□□□□ -0.31
Pde6bP23440 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.1□□□□□ -0.31
Pde6bP23440 Gm10288-201ENSMUST00000084614 537 ntBASIC13.1□□□□□ -0.31
Pde6bP23440 Gm10179-201ENSMUST00000086233 688 ntBASIC13.1□□□□□ -0.31
Pde6bP23440 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pde6bP23440 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.1□□□□□ -0.31
Pde6bP23440 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.1□□□□□ -0.31
Pde6bP23440 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pde6bP23440 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.1□□□□□ -0.31
Pde6bP23440 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6bP23440 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Pde6bP23440 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.09□□□□□ -0.31
Pde6bP23440 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.09□□□□□ -0.31
Pde6bP23440 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pde6bP23440 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pde6bP23440 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.09□□□□□ -0.31
Pde6bP23440 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.09□□□□□ -0.31
Pde6bP23440 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Pde6bP23440 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Gm14724-201ENSMUST00000118400 537 ntBASIC13.09□□□□□ -0.31
Pde6bP23440 Gm2965-201ENSMUST00000198365 343 ntBASIC13.09□□□□□ -0.31
Pde6bP23440 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.09□□□□□ -0.31
Pde6bP23440 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Pde6bP23440 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.09□□□□□ -0.31
Pde6bP23440 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.09□□□□□ -0.31
Pde6bP23440 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.09□□□□□ -0.31
Pde6bP23440 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.09□□□□□ -0.31
Pde6bP23440 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.09□□□□□ -0.31
Pde6bP23440 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms