Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf9P20334 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf9P20334 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf9P20334 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf9P20334 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf9P20334 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf9P20334 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.05□□□□□ -0.8
Tnfrsf9P20334 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf9P20334 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf9P20334 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm11930-201ENSMUST00000117788 190 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm12616-201ENSMUST00000118594 382 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm13059-201ENSMUST00000119881 398 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm13665-201ENSMUST00000120830 528 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm12624-201ENSMUST00000177615 382 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm12621-201ENSMUST00000177760 382 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm12615-201ENSMUST00000177970 382 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm12622-201ENSMUST00000177975 382 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm12627-201ENSMUST00000178412 382 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm12625-201ENSMUST00000179122 382 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm12614-201ENSMUST00000179586 382 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm12613-201ENSMUST00000180323 382 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm42619-201ENSMUST00000197564 1136 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm5904-201ENSMUST00000210286 865 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Zmym2-202ENSMUST00000223669 1281 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf9P20334 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Gm13611-201ENSMUST00000118269 318 ntBASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Gm15547-201ENSMUST00000122152 333 ntBASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Gm25109-201ENSMUST00000122474 114 ntBASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf9P20334 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms