Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Fn1P11276 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Fn1P11276 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Fn1P11276 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Fn1P11276 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Fn1P11276 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Fn1P11276 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Fn1P11276 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Fn1P11276 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC9.13□□□□□ -0.95
Fn1P11276 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.13□□□□□ -0.95
Fn1P11276 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.13□□□□□ -0.95
Fn1P11276 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC9.13□□□□□ -0.95
Fn1P11276 Gm8268-201ENSMUST00000209683 458 ntBASIC9.13□□□□□ -0.95
Fn1P11276 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Gm2553-201ENSMUST00000215986 605 ntBASIC9.13□□□□□ -0.95
Fn1P11276 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.13□□□□□ -0.95
Fn1P11276 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Fn1P11276 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
Fn1P11276 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Fn1P11276 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
Fn1P11276 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.13□□□□□ -0.95
Fn1P11276 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.13□□□□□ -0.95
Fn1P11276 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC9.13□□□□□ -0.95
Fn1P11276 Mir1941-201ENSMUST00000157834 83 ntBASIC9.13□□□□□ -0.95
Fn1P11276 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC9.13□□□□□ -0.95
Fn1P11276 Gm5190-201ENSMUST00000192434 357 ntBASIC9.13□□□□□ -0.95
Fn1P11276 Gm43106-201ENSMUST00000199485 637 ntBASIC9.13□□□□□ -0.95
Fn1P11276 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.13□□□□□ -0.95
Fn1P11276 AC117769.1-201ENSMUST00000224716 1120 ntBASIC9.13□□□□□ -0.95
Fn1P11276 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC9.13□□□□□ -0.95
Fn1P11276 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.13□□□□□ -0.95
Fn1P11276 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Fn1P11276 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Fn1P11276 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.13□□□□□ -0.95
Fn1P11276 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Mir874-201ENSMUST00000104769 76 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Gm12389-201ENSMUST00000117696 418 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC9.12□□□□□ -0.95
Fn1P11276 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC9.12□□□□□ -0.95
Fn1P11276 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Fn1P11276 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Mir453-201ENSMUST00000104732 82 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms