Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm19459-201ENSMUST00000176240 835 ntBASIC17.72■□□□□ 0.43
NclP09405 Mir6546-201ENSMUST00000184460 62 ntBASIC17.72■□□□□ 0.43
NclP09405 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 Gm7395-201ENSMUST00000216059 1045 ntBASIC17.72■□□□□ 0.43
NclP09405 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NclP09405 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 Gm29100-201ENSMUST00000187564 4410 ntBASIC17.72■□□□□ 0.43
NclP09405 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
NclP09405 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NclP09405 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Gm27177-202ENSMUST00000183514 2703 ntBASIC17.71■□□□□ 0.43
NclP09405 Gm43807-201ENSMUST00000200678 1781 ntBASIC17.71■□□□□ 0.43
NclP09405 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NclP09405 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NclP09405 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC17.71■□□□□ 0.43
NclP09405 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC17.71■□□□□ 0.43
NclP09405 Gm4310-201ENSMUST00000177847 889 ntBASIC17.71■□□□□ 0.43
NclP09405 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC17.71■□□□□ 0.43
NclP09405 Gm5051-201ENSMUST00000204085 485 ntBASIC17.71■□□□□ 0.43
NclP09405 Gm43916-201ENSMUST00000205062 967 ntBASIC17.71■□□□□ 0.43
NclP09405 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
NclP09405 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC17.71■□□□□ 0.43
NclP09405 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC17.71■□□□□ 0.43
NclP09405 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NclP09405 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Gm7224-201ENSMUST00000121359 2066 ntBASIC17.71■□□□□ 0.43
NclP09405 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC17.71■□□□□ 0.43
NclP09405 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NclP09405 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
NclP09405 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NclP09405 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
NclP09405 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC17.7■□□□□ 0.42
NclP09405 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NclP09405 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC17.7■□□□□ 0.42
NclP09405 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC17.7■□□□□ 0.42
NclP09405 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC17.7■□□□□ 0.42
NclP09405 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC17.7■□□□□ 0.42
NclP09405 Gm9034-201ENSMUST00000182071 1005 ntBASIC17.7■□□□□ 0.42
NclP09405 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC17.7■□□□□ 0.42
NclP09405 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NclP09405 AC166992.1-201ENSMUST00000216356 565 ntBASIC17.7■□□□□ 0.42
NclP09405 Gm9826-201ENSMUST00000029124 1299 ntBASIC17.7■□□□□ 0.42
NclP09405 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NclP09405 Gm5537-201ENSMUST00000091117 1252 ntBASIC17.7■□□□□ 0.42
NclP09405 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
NclP09405 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NclP09405 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NclP09405 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NclP09405 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NclP09405 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Gm8155-201ENSMUST00000216363 1612 ntBASIC17.69■□□□□ 0.42
NclP09405 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Gm15595-201ENSMUST00000120840 961 ntBASIC17.69■□□□□ 0.42
NclP09405 Gm15881-201ENSMUST00000148792 942 ntBASIC17.69■□□□□ 0.42
NclP09405 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NclP09405 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC17.69■□□□□ 0.42
NclP09405 AC141438.2-201ENSMUST00000215068 271 ntBASIC17.69■□□□□ 0.42
NclP09405 AC135114.1-201ENSMUST00000228682 270 ntBASIC17.69■□□□□ 0.42
NclP09405 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms