Protein–RNA interactions for Protein: P04230

H2-Eb1, H-2 class II histocompatibility antigen, E-B beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-Eb1P04230 Gm18893-201ENSMUST00000198416 943 ntBASIC11.83□□□□□ -0.52
H2-Eb1P04230 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.83□□□□□ -0.52
H2-Eb1P04230 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2-Eb1P04230 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.82□□□□□ -0.52
H2-Eb1P04230 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Gm23931-201ENSMUST00000103842 109 ntBASIC11.82□□□□□ -0.52
H2-Eb1P04230 Gm25214-201ENSMUST00000104573 129 ntBASIC11.82□□□□□ -0.52
H2-Eb1P04230 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.82□□□□□ -0.52
H2-Eb1P04230 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Gm43002-201ENSMUST00000200310 155 ntBASIC11.82□□□□□ -0.52
H2-Eb1P04230 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.82□□□□□ -0.52
H2-Eb1P04230 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.82□□□□□ -0.52
H2-Eb1P04230 Morn2-202ENSMUST00000227729 656 ntBASIC11.82□□□□□ -0.52
H2-Eb1P04230 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.82□□□□□ -0.52
H2-Eb1P04230 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.82□□□□□ -0.52
H2-Eb1P04230 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2-Eb1P04230 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.81□□□□□ -0.52
H2-Eb1P04230 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.81□□□□□ -0.52
H2-Eb1P04230 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.81□□□□□ -0.52
H2-Eb1P04230 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Gm38002-201ENSMUST00000193255 180 ntBASIC11.81□□□□□ -0.52
H2-Eb1P04230 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.81□□□□□ -0.52
H2-Eb1P04230 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2-Eb1P04230 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms