Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vti1aO89116 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm43184-201ENSMUST00000197247 542 ntBASIC12.92□□□□□ -0.34
Vti1aO89116 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.92□□□□□ -0.34
Vti1aO89116 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.92□□□□□ -0.34
Vti1aO89116 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vti1aO89116 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.92□□□□□ -0.34
Vti1aO89116 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.92□□□□□ -0.34
Vti1aO89116 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Vti1aO89116 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vti1aO89116 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Vti1aO89116 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Vti1aO89116 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 Gm23251-201ENSMUST00000103773 110 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 Gm23596-201ENSMUST00000104304 132 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Gm13888-201ENSMUST00000119148 422 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Vti1aO89116 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
Vti1aO89116 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Gm27438-201ENSMUST00000183480 110 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vti1aO89116 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Gm6905-201ENSMUST00000205729 511 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.91□□□□□ -0.34
Vti1aO89116 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.91□□□□□ -0.34
Vti1aO89116 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Gm5455-201ENSMUST00000058710 715 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.91□□□□□ -0.34
Vti1aO89116 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Vti1aO89116 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1aO89116 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.9□□□□□ -0.34
Vti1aO89116 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.9□□□□□ -0.34
Vti1aO89116 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vti1aO89116 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vti1aO89116 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Matn2-203ENSMUST00000226766 3252 ntBASIC12.9□□□□□ -0.34
Vti1aO89116 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.9□□□□□ -0.34
Vti1aO89116 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Gm24891-201ENSMUST00000104391 136 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms