Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cops4O88544 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cops4O88544 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cops4O88544 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cops4O88544 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cops4O88544 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cops4O88544 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cops4O88544 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.02□□□□□ -0.65
Cops4O88544 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.02□□□□□ -0.65
Cops4O88544 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cops4O88544 Gm7029-201ENSMUST00000173226 450 ntBASIC11.02□□□□□ -0.65
Cops4O88544 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.02□□□□□ -0.65
Cops4O88544 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.02□□□□□ -0.65
Cops4O88544 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.02□□□□□ -0.65
Cops4O88544 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Gm10268-201ENSMUST00000085340 555 ntBASIC11.02□□□□□ -0.65
Cops4O88544 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Cops4O88544 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cops4O88544 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cops4O88544 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Cops4O88544 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cops4O88544 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cops4O88544 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cops4O88544 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Cops4O88544 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.01□□□□□ -0.65
Cops4O88544 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Cops4O88544 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.01□□□□□ -0.65
Cops4O88544 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.01□□□□□ -0.65
Cops4O88544 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.01□□□□□ -0.65
Cops4O88544 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Gm11597-201ENSMUST00000121423 964 ntBASIC11.01□□□□□ -0.65
Cops4O88544 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cops4O88544 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.01□□□□□ -0.65
Cops4O88544 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cops4O88544 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cops4O88544 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.01□□□□□ -0.65
Cops4O88544 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cops4O88544 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.01□□□□□ -0.65
Cops4O88544 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Cops4O88544 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cops4O88544 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cops4O88544 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11□□□□□ -0.65
Cops4O88544 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms