Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.66□□□□□ -0.38
Itgb3O54890 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Itgb3O54890 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.65□□□□□ -0.38
Itgb3O54890 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Itgb3O54890 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Itgb3O54890 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Itgb3O54890 Gm9062-201ENSMUST00000117712 727 ntBASIC12.65□□□□□ -0.38
Itgb3O54890 Gm13461-201ENSMUST00000120980 662 ntBASIC12.65□□□□□ -0.38
Itgb3O54890 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.65□□□□□ -0.38
Itgb3O54890 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Itgb3O54890 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Itgb3O54890 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Gm45575-201ENSMUST00000210283 548 ntBASIC12.65□□□□□ -0.38
Itgb3O54890 Gm2553-201ENSMUST00000215986 605 ntBASIC12.65□□□□□ -0.38
Itgb3O54890 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.65□□□□□ -0.38
Itgb3O54890 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.65□□□□□ -0.38
Itgb3O54890 Gm1821-202ENSMUST00000227415 750 ntBASIC12.65□□□□□ -0.38
Itgb3O54890 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.65□□□□□ -0.38
Itgb3O54890 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Itgb3O54890 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.65□□□□□ -0.38
Itgb3O54890 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Itgb3O54890 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Itgb3O54890 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Itgb3O54890 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Itgb3O54890 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Itgb3O54890 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Itgb3O54890 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Itgb3O54890 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.64□□□□□ -0.39
Itgb3O54890 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.64□□□□□ -0.39
Itgb3O54890 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.64□□□□□ -0.39
Itgb3O54890 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Itgb3O54890 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Itgb3O54890 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Itgb3O54890 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.64□□□□□ -0.39
Itgb3O54890 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.64□□□□□ -0.39
Itgb3O54890 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.64□□□□□ -0.39
Itgb3O54890 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.64□□□□□ -0.39
Itgb3O54890 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Itgb3O54890 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Itgb3O54890 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.64□□□□□ -0.39
Itgb3O54890 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Itgb3O54890 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Itgb3O54890 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Itgb3O54890 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Itgb3O54890 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Itgb3O54890 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.63□□□□□ -0.39
Itgb3O54890 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Itgb3O54890 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.63□□□□□ -0.39
Itgb3O54890 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Itgb3O54890 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Itgb3O54890 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Itgb3O54890 Gm12165-201ENSMUST00000117047 342 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms